
Basically you need to go into the main WSUS console (from Admin Tools) then Options and Server Cleanup Wizard. Running this with just the first option for Unused Updates fixed both servers. The PowerEdge took 18 hours to complete - reporting unused updates 11,092 and revisions 3,830. Sounds like this WSUS maintenance needs to happen on a monthly/quarterly schedule to keep the server optimised.
The basic server crashed out at 19 hours with SQL timeout errors. The monitoring report didn't come back immediately, until after a reboot.
Both are happy again ... me included :-)
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